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Use of CAMRA Wiki

CAMRA researchers welcome submissions to the Wiki. Key quantitative information is needed to undertake a QMRA. This begins with problem formulation and includes articulation of the venue, hazards, exposure pathways and necessary data. We have developed forms or will be developing forms which can be used to fill in key information regarding.

HAZ ID
Dose-Response
Exposure Assessment
Risk Characterization

Agent Overview

Bacillus anthracis

Bacillus anthracis The part "|Bacillus anthracis" of the query was not understood. Results might not be as expected.

Burkholderia

Burkholderia The part "|Burkholderia" of the query was not understood. Results might not be as expected.

Campylobacter jejuni

Campylobacter jejuni The part "|Campylobacter jejuni" of the query was not understood. Results might not be as expected.

Coxiella burnetii

Coxiella burnetii The part "|Coxiella burnetii" of the query was not understood. Results might not be as expected.

Cyanobacteria

Cyanobacteria The part "|Cyanobacteria" of the query was not understood. Results might not be as expected.

Escherichia coli

Escherichia coli The part "|Escherichia coli" of the query was not understood. Results might not be as expected.

Francisella tularensis

Francisella tularensis The part "|Francisella tularensis" of the query was not understood. Results might not be as expected.

Legionella pneumophila

Legionella pneumophila The part "|Legionella pneumophila" of the query was not understood. Results might not be as expected.

Listeria monocytogenes

Listeria monocytogenes The part "|Listeria monocytogenes" of the query was not understood. Results might not be as expected.

Mycobacterium avium

Mycobacterium avium The part "|Mycobacterium avium" of the query was not understood. Results might not be as expected.

Pseudomonas aeruginosa

Pseudomonas aeruginosa The part "|Pseudomonas aeruginosa" of the query was not understood. Results might not be as expected.

Rickettsia rickettsii

Rickettsia rickettsii The part "|Rickettsia rickettsii" of the query was not understood. Results might not be as expected.

Salmonella

Salmonella The part "|Salmonella" of the query was not understood. Results might not be as expected.

Shigella sp.

Shigella sp. The part "|Shigella sp." of the query was not understood. Results might not be as expected.

Staphylococcus ayreus

Staphylococcus ayreus The part "|Staphylococcus ayreus" of the query was not understood. Results might not be as expected.

Variola major

Variola major The part "|Variola major" of the query was not understood. Results might not be as expected.

Vibrio cholerae

Vibrio cholerae The part "|Vibrio cholerae" of the query was not understood. Results might not be as expected.

Yersinia pestis

Yersinia pestis The part "|Yersinia pestis" of the query was not understood. Results might not be as expected.

Burkholderia

Testing R-formatted template content

TITLE Dose MILD TO SEVERE DIARRHEA NOT MILD TO SEVERE DIARRHEA Total 1E+04 0 5 5 1E+06 1 8 9 1E+08 3 2 5

TITLE Dose MILD TO SEVERE DIARRHEA NOT MILD TO SEVERE DIARRHEA Total 1E+04 0 5 5 1E+06 1 8 9 1E+08 3 2 5

TITLE Dose MILD TO SEVERE DIARRHEA NOT MILD TO SEVERE DIARRHEA Total 1E+04 0 5 5 1E+06 1 8 9 1E+08 3 2 5

References

Goodness of fit and model selection Model Deviance Δ Degrees of freedom χ20.95,1 p-value χ20.95,m-k p-value Exponential 2.99 2.98 2 3.84 0.0845 5.99 0.224 Beta Poisson 0.0156 1 3.84 0.901 Exponential is preferred to beta-Poisson; cannot reject good fit for exponential.

Optimized parameters for the beta-Poisson model, from 500 bootstrap iterations Parameter MLE estimate Percentiles 0.5% 2.5% 5% 95% 97.5% 99.5% α 2.13E-01 1.26E-03 3.22E-02 3.22E-02 2.66E+02 3.62E+02 1.25E+03 N50 3.41E+07 1.91E+06 2.78E+06 5.87E+06 1.01E+14 1.01E+14 9.22E+140

Optimized k parameter and N50 for the exponential model, from 500 bootstrap iterations Parameter MLE estimate Percentiles 0.5% 2.5% 5% 95% 97.5% 99.5% k 2.13E-01 2.19E-09 2.19E-09 4.40E-09 4.03E-08 1.17E-07 2.50E-07 {{{N50type}}}* 3.41E+07 2.78E+06 5.92E+06 1.72E+07 1.58E+08 3.17E+08 3.17E+08 *Not a parameter of the exponential model; however, it facilitates comparison with other models.

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TITLE Dose death not death Total 100 1 3 4 1000 3 1 4 1E+04 4 0 4 1E+05 4 0 4

Goodness of fit and model selection Model Deviance Δ Degrees of freedom χ20.95,1 p-value χ20.95,m-k p-value Exponential 0.338 0.195 3 3.84 0.658 7.81 0.953 Beta Poisson 0.142 2 5.99 0.931 Exponential is preferred to beta-Poisson; cannot reject good fit for exponential.

Optimized k parameter and N50 for the exponential model, from 500 bootstrap iterations Parameter MLE estimate Percentiles 0.5% 2.5% 5% 95% 97.5% 99.5% k 1.82E+00 3.62E-04 5.50E-04 6.22E-04 7.02E-03 7.02E-03 7.02E-03 {{{N50type}}}* 3.38E+02 9.87E+01 9.87E+01 9.87E+01 1.11E+03 1.26E+03 1.92E+03 *Not a parameter of the exponential model; however, it facilitates comparison with other models.